Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.65■□□□□ 0.1
TRIM38O00635 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.65■□□□□ 0.1
TRIM38O00635 TMEM261P1-201ENST00000604899 340 ntBASIC15.65■□□□□ 0.1
TRIM38O00635 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM38O00635 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM38O00635 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM38O00635 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRIM38O00635 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM38O00635 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.64■□□□□ 0.09
TRIM38O00635 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 RRP7BP-205ENST00000566851 833 ntBASIC15.64■□□□□ 0.09
TRIM38O00635 MIR4259-201ENST00000584466 101 ntBASIC15.64■□□□□ 0.09
TRIM38O00635 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 AL365330.1-201ENST00000607459 531 ntBASIC15.64■□□□□ 0.09
TRIM38O00635 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
TRIM38O00635 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRIM38O00635 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRIM38O00635 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TRIM38O00635 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM38O00635 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM38O00635 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM38O00635 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 AC007389.4-201ENST00000454674 793 ntBASIC15.63■□□□□ 0.09
TRIM38O00635 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM38O00635 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM38O00635 AC022494.1-201ENST00000466044 728 ntBASIC15.63■□□□□ 0.09
TRIM38O00635 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM38O00635 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC15.63■□□□□ 0.09
TRIM38O00635 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
TRIM38O00635 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM38O00635 RARRES2P5-201ENST00000564013 466 ntBASIC15.63■□□□□ 0.09
TRIM38O00635 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.63■□□□□ 0.09
TRIM38O00635 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.63■□□□□ 0.09
TRIM38O00635 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 AL033527.5-201ENST00000641382 801 ntBASIC15.63■□□□□ 0.09
TRIM38O00635 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 FLJ16779-201ENST00000612722 7638 ntBASIC15.63■□□□□ 0.09
TRIM38O00635 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRIM38O00635 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms