Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 FGFR3P1-201ENST00000449999 601 ntBASIC20.23■□□□□ 0.83
PIK3C2AO00443 AC006122.1-201ENST00000493323 440 ntBASIC20.23■□□□□ 0.83
PIK3C2AO00443 FADS2-212ENST00000522639 360 ntTSL 5 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 STUB1-204ENST00000564370 875 ntTSL 2 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 FADS2-215ENST00000574708 385 ntTSL 3 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 RN7SL163P-201ENST00000583100 276 ntBASIC20.23■□□□□ 0.83
PIK3C2AO00443 AC008805.1-201ENST00000590892 364 ntBASIC20.23■□□□□ 0.83
PIK3C2AO00443 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 AL365203.3-201ENST00000609742 2057 ntBASIC20.23■□□□□ 0.83
PIK3C2AO00443 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PIK3C2AO00443 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PIK3C2AO00443 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AC090857.1-201ENST00000527400 390 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 CYP4F23P-201ENST00000593402 1579 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AC006480.2-201ENST00000609770 1337 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AC079328.2-201ENST00000561241 3354 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AC087481.3-201ENST00000602886 1894 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 FAM58BP-201ENST00000439056 645 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 GCOM2-201ENST00000509133 1104 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 IQSEC3P1-201ENST00000538799 536 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 AC012044.1-201ENST00000603431 297 ntBASIC20.22■□□□□ 0.83
PIK3C2AO00443 STRN-202ENST00000379213 2254 ntTSL 5 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PIK3C2AO00443 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.22■□□□□ 0.83
PIK3C2AO00443 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 AC008267.1-201ENST00000474858 1069 ntBASIC20.21■□□□□ 0.83
PIK3C2AO00443 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC20.21■□□□□ 0.83
PIK3C2AO00443 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PIK3C2AO00443 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms