Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 COX5BP1-201ENST00000507622 393 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC015967.2-201ENST00000624092 234 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC006435.4-201ENST00000625037 234 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AL356737.1-201ENST00000634391 234 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 PCDH8P1-201ENST00000428983 2773 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 AC018735.1-201ENST00000437208 1502 ntBASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC187A0A096LP49 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 UPF3AP2-201ENST00000457924 1132 ntBASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AC079328.1-201ENST00000560358 952 ntBASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AL451050.2-201ENST00000606967 682 ntBASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AC007663.3-201ENST00000609632 465 ntBASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CCDC187A0A096LP49 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 KRT8P14-201ENST00000414254 1442 ntBASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC187A0A096LP49 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms