Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 MST1L-201ENST00000442552 2185 ntBASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGC4Q9Y5F7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AC022532.1-201ENST00000624563 1728 ntBASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 C1QBPP1-201ENST00000400117 770 ntBASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AP006294.1-201ENST00000415407 339 ntBASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 PTPA-220ENST00000436883 532 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AC124283.3-201ENST00000570869 594 ntBASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AL033527.5-201ENST00000641382 801 ntBASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGC4Q9Y5F7 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGC4Q9Y5F7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms