Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 AL133267.1-201ENST00000398220 340 ntBASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 KRT223P-202ENST00000449164 1292 ntBASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 CROCCP4-201ENST00000457096 498 ntBASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 COX11-210ENST00000639671 696 ntBASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 AC126365.1-201ENST00000578585 1514 ntBASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 DEK-201ENST00000244776 1441 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 AC006486.2-201ENST00000624246 2199 ntBASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDHB1Q9Y5F3 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC084364.1-201ENST00000551967 1556 ntBASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC245100.3-201ENST00000441281 285 ntBASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC007389.4-201ENST00000454674 793 ntBASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC015910.1-201ENST00000579400 975 ntBASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC008735.3-201ENST00000596646 500 ntBASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC133552.6-201ENST00000613406 534 ntBASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDHB1Q9Y5F3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 KRT8P44-201ENST00000441609 1350 ntBASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 TSPY26P-202ENST00000565928 3884 ntBASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 AC138035.3-201ENST00000622706 2791 ntBASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDHB1Q9Y5F3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms