Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 MEIS3P1-201ENST00000495167 958 ntBASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 LINC02349-201ENST00000561386 963 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 SRD5A3P1-201ENST00000603021 949 ntBASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 AC097520.1-201ENST00000624435 385 ntBASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PCDHB13Q9Y5F0 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 AC015910.1-201ENST00000579400 975 ntBASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 BNIP3P35-201ENST00000604530 490 ntBASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 AJ011932.1-201ENST00000621707 465 ntBASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 AC106795.5-201ENST00000623288 454 ntBASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PCDHB13Q9Y5F0 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PCDHB13Q9Y5F0 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms