Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
CTDP1Q9Y5B0 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 FAM86MP-201ENST00000340703 885 ntBASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 AC025181.2-201ENST00000606994 802 ntBASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTDP1Q9Y5B0 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 AL355994.2-201ENST00000447882 704 ntBASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 RNA5SP412-201ENST00000516234 123 ntBASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 KRT90P-201ENST00000549264 1064 ntBASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 AL583810.1-201ENST00000553344 1045 ntBASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.87■□□□□ 0.45
CTDP1Q9Y5B0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.86■□□□□ 0.45
CTDP1Q9Y5B0 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms