Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 ANKRD19P-201ENST00000338192 862 ntBASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC092933.1-201ENST00000393644 945 ntBASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 RPS2P32-201ENST00000439199 892 ntBASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC007551.1-201ENST00000457394 519 ntBASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 FTH1P14-201ENST00000482930 551 ntBASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC119751.2-201ENST00000504529 210 ntBASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC00588Q9Y4M8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 PGGT1BP2-201ENST00000398621 1028 ntBASIC10.59□□□□□ -0.71
LINC00588Q9Y4M8 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms