Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 AC007686.3-201ENST00000619017 3487 ntBASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 TSEN15P1-201ENST00000423257 515 ntBASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 AL033527.5-202ENST00000641632 1098 ntBASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RNF11Q9Y3C5 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AGAP7P-201ENST00000582299 2062 ntBASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AGAP14-201ENST00000624701 2060 ntBASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 Z92544.3-201ENST00000624747 417 ntBASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 PKD1P5-201ENST00000532415 10291 ntBASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 AC084364.1-201ENST00000551967 1556 ntBASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF11Q9Y3C5 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF11Q9Y3C5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms