Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 REXO1L1P-202ENST00000608646 1974 ntBASIC13.49□□□□□ -0.25
TREM2Q9NZC2 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.49□□□□□ -0.25
TREM2Q9NZC2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 HIST3H2BA-201ENST00000436555 524 ntBASIC13.48□□□□□ -0.25
TREM2Q9NZC2 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.48□□□□□ -0.25
TREM2Q9NZC2 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.48□□□□□ -0.25
TREM2Q9NZC2 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.48□□□□□ -0.25
TREM2Q9NZC2 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 AC007541.1-201ENST00000570282 1469 ntBASIC13.48□□□□□ -0.25
TREM2Q9NZC2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.48□□□□□ -0.25
TREM2Q9NZC2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.47□□□□□ -0.25
TREM2Q9NZC2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms