Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 AC016694.1-201ENST00000434179 700 ntBASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TM9SF3Q9HD45 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 AL606495.2-201ENST00000605867 535 ntBASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 MIR6787-201ENST00000616675 61 ntBASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.52■□□□□ 0.08
TM9SF3Q9HD45 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 AL133338.1-201ENST00000565695 1517 ntBASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TM9SF3Q9HD45 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 KRT8P44-201ENST00000441609 1350 ntBASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 AP005117.1-202ENST00000581724 1908 ntBASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.51■□□□□ 0.07
TM9SF3Q9HD45 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms