Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 CLEC4GP1-201ENST00000596555 870 ntBASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
SND1-IT1Q9HBX3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 AC127383.1-201ENST00000444697 1800 ntBASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
SND1-IT1Q9HBX3 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 FAM210CP-201ENST00000445714 574 ntBASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 RNPS1P1-201ENST00000507437 918 ntBASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 AL078644.1-201ENST00000609881 752 ntBASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.45□□□□□ -0.74
SND1-IT1Q9HBX3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms