Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 IGHV3-42-201ENST00000520410 361 ntBASIC14.83□□□□□ -0.04
BRF2Q9HAW0 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.83□□□□□ -0.04
BRF2Q9HAW0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
BRF2Q9HAW0 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.82□□□□□ -0.04
BRF2Q9HAW0 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MEIS3P1-201ENST00000495167 958 ntBASIC14.82□□□□□ -0.04
BRF2Q9HAW0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
BRF2Q9HAW0 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AP000845.1-201ENST00000581677 2131 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 DUX4L27-201ENST00000554796 1261 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 AC009407.1-201ENST00000568958 598 ntBASIC14.81□□□□□ -0.04
BRF2Q9HAW0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
BRF2Q9HAW0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms