Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC008741.2-201ENST00000612792 3115 ntBASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 AC112693.3-201ENST00000624819 1983 ntBASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRIM62Q9BVG3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC148477.4-201ENST00000613430 1793 ntBASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC012508.2-201ENST00000567613 1472 ntBASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC007389.4-201ENST00000454674 793 ntBASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AP005018.1-201ENST00000525475 301 ntBASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AC012645.4-201ENST00000610691 1061 ntBASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRIM62Q9BVG3 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 PCDHA3-202ENST00000532566 4594 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 KRT17P7-201ENST00000451704 1104 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 KRT18P25-201ENST00000508931 1278 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AC015936.2-201ENST00000593177 259 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AP005019.2-201ENST00000615104 511 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 WASH3P-207ENST00000560956 1394 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AL139384.1-201ENST00000612143 3047 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 AC007787.1-201ENST00000588095 1583 ntBASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.09■□□□□ 0.17
TRIM62Q9BVG3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.08■□□□□ 0.17
TRIM62Q9BVG3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.08■□□□□ 0.17
TRIM62Q9BVG3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
TRIM62Q9BVG3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms