Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 TSSK5P-201ENST00000423978 907 ntBASIC13.8□□□□□ -0.2
VRK1Q99986 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.8□□□□□ -0.2
VRK1Q99986 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.8□□□□□ -0.2
VRK1Q99986 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC13.8□□□□□ -0.2
VRK1Q99986 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 AC087499.5-201ENST00000452760 1342 ntBASIC13.8□□□□□ -0.2
VRK1Q99986 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 CICP24-201ENST00000605464 2705 ntBASIC13.8□□□□□ -0.2
VRK1Q99986 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC13.8□□□□□ -0.2
VRK1Q99986 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.8□□□□□ -0.2
VRK1Q99986 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VRK1Q99986 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.8□□□□□ -0.2
VRK1Q99986 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK1Q99986 AC139749.1-202ENST00000617529 3139 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK1Q99986 AC005089.1-201ENST00000619486 2241 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
VRK1Q99986 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.79□□□□□ -0.2
VRK1Q99986 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.79□□□□□ -0.2
VRK1Q99986 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.79□□□□□ -0.2
VRK1Q99986 MRPS18AP1-201ENST00000414458 589 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 AC015922.1-201ENST00000421102 1152 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 RN7SL618P-201ENST00000477850 296 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 BANF1P1-201ENST00000553684 263 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.79□□□□□ -0.2
VRK1Q99986 AC061975.2-201ENST00000581722 295 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.79□□□□□ -0.2
VRK1Q99986 AL133215.2-201ENST00000609242 977 ntBASIC13.79□□□□□ -0.2
VRK1Q99986 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
VRK1Q99986 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK1Q99986 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VRK1Q99986 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VRK1Q99986 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VRK1Q99986 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.79□□□□□ -0.2
VRK1Q99986 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
VRK1Q99986 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.78□□□□□ -0.2
VRK1Q99986 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
VRK1Q99986 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms