Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.16■□□□□ 0.18
SMOQ99835 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.16■□□□□ 0.18
SMOQ99835 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.16■□□□□ 0.18
SMOQ99835 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.16■□□□□ 0.18
SMOQ99835 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.16■□□□□ 0.18
SMOQ99835 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SMOQ99835 KRT8P35-201ENST00000483942 1338 ntBASIC16.16■□□□□ 0.18
SMOQ99835 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.16■□□□□ 0.18
SMOQ99835 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 AC073347.1-201ENST00000421633 2643 ntBASIC16.15■□□□□ 0.18
SMOQ99835 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 ANKRD19P-201ENST00000338192 862 ntBASIC16.15■□□□□ 0.18
SMOQ99835 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SMOQ99835 ACTBP8-201ENST00000403258 1108 ntBASIC16.15■□□□□ 0.18
SMOQ99835 MIR1909-201ENST00000411312 80 ntBASIC16.15■□□□□ 0.18
SMOQ99835 KRT43P-201ENST00000434019 910 ntBASIC16.15■□□□□ 0.18
SMOQ99835 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.15■□□□□ 0.18
SMOQ99835 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.15■□□□□ 0.18
SMOQ99835 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 FTH1P14-201ENST00000482930 551 ntBASIC16.15■□□□□ 0.18
SMOQ99835 KRT18P25-201ENST00000508931 1278 ntBASIC16.15■□□□□ 0.18
SMOQ99835 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.15■□□□□ 0.18
SMOQ99835 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 AC145423.3-201ENST00000615987 467 ntBASIC16.15■□□□□ 0.18
SMOQ99835 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SMOQ99835 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 AC013268.4-201ENST00000637413 2228 ntBASIC16.15■□□□□ 0.18
SMOQ99835 REXO1L4P-201ENST00000605109 1937 ntBASIC16.15■□□□□ 0.18
SMOQ99835 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SMOQ99835 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SMOQ99835 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SMOQ99835 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
SMOQ99835 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 CICP6-201ENST00000457191 2729 ntBASIC16.14■□□□□ 0.17
SMOQ99835 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SMOQ99835 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.14■□□□□ 0.17
SMOQ99835 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SMOQ99835 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 HLA-K-203ENST00000430151 1046 ntBASIC16.14■□□□□ 0.17
SMOQ99835 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SMOQ99835 ATP5G2P4-201ENST00000442175 420 ntBASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms