Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 AC117489.1-201ENST00000625169 3217 ntBASIC15.26■□□□□ 0.03
NPAS2Q99743 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
NPAS2Q99743 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
NPAS2Q99743 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPAS2Q99743 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS2Q99743 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 PRYP6-201ENST00000514804 343 ntBASIC15.25■□□□□ 0.03
NPAS2Q99743 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS2Q99743 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPAS2Q99743 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS2Q99743 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPAS2Q99743 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS2Q99743 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPAS2Q99743 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 BCRP1-201ENST00000444246 691 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 KLF2P3-201ENST00000451977 1087 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS2Q99743 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.24■□□□□ 0.03
NPAS2Q99743 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS2Q99743 LINC02084-201ENST00000606069 1096 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 MIR6080-201ENST00000617359 66 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 AC104581.4-201ENST00000623126 3052 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS2Q99743 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 MIR600HG-201ENST00000449175 5984 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS2Q99743 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS2Q99743 MROH4P-201ENST00000431302 1578 ntBASIC15.24■□□□□ 0.03
NPAS2Q99743 AP3S2-216ENST00000617003 1561 ntBASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms