Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDK5RAP2Q96SN8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 RN7SL574P-201ENST00000581512 297 ntBASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 SHC1P1-201ENST00000425230 1745 ntBASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 AL590440.2-201ENST00000641973 1595 ntBASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 AC138028.6-201ENST00000616106 1482 ntBASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 AC020910.5-201ENST00000623668 1865 ntBASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 AL360270.3-201ENST00000609118 1348 ntBASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CDK5RAP2Q96SN8 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 AL109954.1-202ENST00000564051 2148 ntBASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CDK5RAP2Q96SN8 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 RNMTL1P1-201ENST00000454103 560 ntBASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 AC244157.2-201ENST00000616239 1006 ntBASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.83■□□□□ 0.44
CDK5RAP2Q96SN8 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 HLA-J-204ENST00000495278 958 ntBASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 AL645939.5-201ENST00000606834 243 ntBASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 AC026740.1-201ENST00000607068 791 ntBASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.82■□□□□ 0.44
CDK5RAP2Q96SN8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms