Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AL391005.1-201ENST00000623953 2435 ntBASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AC015909.3-201ENST00000572855 1794 ntBASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 GHSR-202ENST00000427970 912 ntBASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AC021723.1-201ENST00000486306 515 ntBASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AL157791.1-201ENST00000553667 1699 ntBASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CSMD1Q96PZ7 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 SNX15-201ENST00000352068 771 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 OR2K2-202ENST00000374428 1038 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AC073911.3-201ENST00000624401 631 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AC020763.4-201ENST00000623414 4170 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AL627231.1-201ENST00000394467 1125 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 RPL18AP3-201ENST00000462885 528 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 RN7SL67P-201ENST00000492147 296 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AC005632.3-201ENST00000605544 308 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 MIR6816-201ENST00000620368 66 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 FAM8A4P-201ENST00000435433 1213 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 RPL7P35-201ENST00000446943 740 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AC027237.1-201ENST00000560942 655 ntBASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.92□□□□□ -0.34
CSMD1Q96PZ7 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AL136309.1-201ENST00000403917 691 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 PSMD4P1-201ENST00000433951 1109 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 AL645728.2-202ENST00000641679 227 ntBASIC12.91□□□□□ -0.34
CSMD1Q96PZ7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms