Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 ARSEP1-201ENST00000420443 635 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC023310.3-201ENST00000557027 670 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC100756.1-201ENST00000562736 682 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC138749.3-201ENST00000567691 622 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC132938.2-201ENST00000579188 680 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC116165.1-201ENST00000611806 668 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 AL591163.1-201ENST00000641757 987 ntBASIC18.45■□□□□ 0.54
DDX11Q96FC9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
DDX11Q96FC9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
DDX11Q96FC9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 HIST3H2BA-201ENST00000436555 524 ntBASIC18.44■□□□□ 0.54
DDX11Q96FC9 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 MYCLP2-201ENST00000449268 967 ntBASIC18.44■□□□□ 0.54
DDX11Q96FC9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 MIR6752-201ENST00000618442 71 ntBASIC18.44■□□□□ 0.54
DDX11Q96FC9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.44■□□□□ 0.54
DDX11Q96FC9 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.44■□□□□ 0.54
DDX11Q96FC9 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
DDX11Q96FC9 AC067930.6-201ENST00000623257 4947 ntBASIC18.44■□□□□ 0.54
DDX11Q96FC9 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 AL589987.1-201ENST00000453380 819 ntBASIC18.43■□□□□ 0.54
DDX11Q96FC9 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 IGHV3-71-201ENST00000523324 359 ntBASIC18.43■□□□□ 0.54
DDX11Q96FC9 TIMM17BP1-201ENST00000545713 516 ntBASIC18.43■□□□□ 0.54
DDX11Q96FC9 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.43■□□□□ 0.54
DDX11Q96FC9 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX11Q96FC9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms