Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
ERCC4Q92889 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
ERCC4Q92889 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 LINC01101-201ENST00000622953 1884 ntBASIC17.65■□□□□ 0.42
ERCC4Q92889 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ERCC4Q92889 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 CEND1P1-201ENST00000451006 455 ntBASIC17.65■□□□□ 0.42
ERCC4Q92889 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.65■□□□□ 0.42
ERCC4Q92889 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 AL359258.3-201ENST00000622910 2331 ntBASIC17.65■□□□□ 0.42
ERCC4Q92889 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.65■□□□□ 0.42
ERCC4Q92889 AC015656.1-201ENST00000624209 3578 ntBASIC17.65■□□□□ 0.42
ERCC4Q92889 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ERCC4Q92889 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
ERCC4Q92889 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERCC4Q92889 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ERCC4Q92889 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.64■□□□□ 0.42
ERCC4Q92889 AC007191.1-201ENST00000623179 2995 ntBASIC17.64■□□□□ 0.42
ERCC4Q92889 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
ERCC4Q92889 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.64■□□□□ 0.42
ERCC4Q92889 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 AC136604.1-201ENST00000418535 575 ntBASIC17.64■□□□□ 0.41
ERCC4Q92889 AL645939.2-201ENST00000427340 991 ntBASIC17.64■□□□□ 0.41
ERCC4Q92889 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 ALG1L8P-201ENST00000533887 760 ntBASIC17.64■□□□□ 0.41
ERCC4Q92889 AC105021.1-202ENST00000570572 669 ntBASIC17.64■□□□□ 0.41
ERCC4Q92889 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
ERCC4Q92889 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.64■□□□□ 0.41
ERCC4Q92889 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.64■□□□□ 0.41
ERCC4Q92889 AC005912.2-201ENST00000619492 2400 ntBASIC17.64■□□□□ 0.41
ERCC4Q92889 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 ELL2P1-201ENST00000413990 1906 ntBASIC17.64■□□□□ 0.41
ERCC4Q92889 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.64■□□□□ 0.41
ERCC4Q92889 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ERCC4Q92889 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.64■□□□□ 0.41
ERCC4Q92889 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC4Q92889 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ERCC4Q92889 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ERCC4Q92889 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.63■□□□□ 0.41
ERCC4Q92889 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ERCC4Q92889 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms