Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.72□□□□□ -0.21
AP3S1Q92572 MTDHP4-201ENST00000600287 670 ntBASIC13.72□□□□□ -0.21
AP3S1Q92572 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
AP3S1Q92572 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
AP3S1Q92572 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S1Q92572 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.72□□□□□ -0.21
AP3S1Q92572 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
AP3S1Q92572 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
AP3S1Q92572 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
AP3S1Q92572 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.72□□□□□ -0.21
AP3S1Q92572 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
AP3S1Q92572 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.71□□□□□ -0.21
AP3S1Q92572 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AP3S1Q92572 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
AP3S1Q92572 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.71□□□□□ -0.21
AP3S1Q92572 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 HMGA1P7-201ENST00000406908 502 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 KRT16P4-201ENST00000453883 522 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 KRT18P31-201ENST00000506277 1292 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.71□□□□□ -0.21
AP3S1Q92572 AC012615.1-201ENST00000565797 1299 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.71□□□□□ -0.21
AP3S1Q92572 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC13.71□□□□□ -0.21
AP3S1Q92572 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.71□□□□□ -0.21
AP3S1Q92572 AC069148.1-201ENST00000608741 768 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.71□□□□□ -0.21
AP3S1Q92572 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 AL645728.2-201ENST00000641974 660 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
AP3S1Q92572 MST1P2-201ENST00000457982 2291 ntBASIC13.71□□□□□ -0.21
AP3S1Q92572 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
AP3S1Q92572 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
AP3S1Q92572 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
AP3S1Q92572 AC015802.1-201ENST00000588104 1449 ntBASIC13.71□□□□□ -0.22
AP3S1Q92572 AL691432.1-201ENST00000596308 1422 ntBASIC13.71□□□□□ -0.22
AP3S1Q92572 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.71□□□□□ -0.22
AP3S1Q92572 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S1Q92572 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.71□□□□□ -0.22
AP3S1Q92572 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S1Q92572 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
AP3S1Q92572 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S1Q92572 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S1Q92572 AC073439.1-201ENST00000624121 1774 ntBASIC13.71□□□□□ -0.22
AP3S1Q92572 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.71□□□□□ -0.22
AP3S1Q92572 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S1Q92572 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.71□□□□□ -0.22
AP3S1Q92572 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
AP3S1Q92572 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
AP3S1Q92572 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
AP3S1Q92572 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AP3S1Q92572 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AP3S1Q92572 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
AP3S1Q92572 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
AP3S1Q92572 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
AP3S1Q92572 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms