Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF4Q92544 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.7□□□□□ -0.06
TM9SF4Q92544 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.7□□□□□ -0.06
TM9SF4Q92544 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF4Q92544 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF4Q92544 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF4Q92544 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF4Q92544 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TM9SF4Q92544 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.7□□□□□ -0.06
TM9SF4Q92544 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TM9SF4Q92544 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TM9SF4Q92544 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 AC079776.1-201ENST00000401540 1152 ntBASIC14.69□□□□□ -0.06
TM9SF4Q92544 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 RAD18-204ENST00000418463 563 ntTSL 4 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.69□□□□□ -0.06
TM9SF4Q92544 RAD18-205ENST00000421052 582 ntTSL 3 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 AL589987.1-201ENST00000453380 819 ntBASIC14.69□□□□□ -0.06
TM9SF4Q92544 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 WFDC1-204ENST00000613603 549 ntBASIC14.69□□□□□ -0.06
TM9SF4Q92544 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 FAM45BP-202ENST00000592932 1624 ntBASIC14.69□□□□□ -0.06
TM9SF4Q92544 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TM9SF4Q92544 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
TM9SF4Q92544 AC006486.2-201ENST00000624246 2199 ntBASIC14.68□□□□□ -0.06
TM9SF4Q92544 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 Z97205.2-201ENST00000564697 1639 ntBASIC14.68□□□□□ -0.06
TM9SF4Q92544 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TM9SF4Q92544 AL162726.2-201ENST00000438986 1017 ntBASIC14.68□□□□□ -0.06
TM9SF4Q92544 AC022210.1-201ENST00000449856 793 ntBASIC14.68□□□□□ -0.06
TM9SF4Q92544 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.68□□□□□ -0.06
TM9SF4Q92544 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms