Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 FAM21FP-201ENST00000426241 1131 ntBASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 AL355994.2-201ENST00000447882 704 ntBASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 GAPDHP40-201ENST00000505218 1006 ntBASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SHKBP1Q8TBC3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AC026954.1-201ENST00000429771 1293 ntBASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SHKBP1Q8TBC3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.24■□□□□ 0.19
SHKBP1Q8TBC3 MIR6869-201ENST00000619434 62 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms