Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SMARCC2Q8TAQ2 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
SMARCC2Q8TAQ2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 MEIS3P1-201ENST00000495167 958 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AC023310.3-201ENST00000557027 670 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AC100756.1-201ENST00000562736 682 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AC138749.3-201ENST00000567691 622 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 SPDYE22P-201ENST00000582158 798 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AC116165.1-201ENST00000611806 668 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AC105233.6-201ENST00000642093 218 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AC068418.2-201ENST00000577309 3703 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 AL391825.1-201ENST00000457671 1364 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 LINC01101-201ENST00000622953 1884 ntBASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SMARCC2Q8TAQ2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 AC087499.6-201ENST00000411576 835 ntBASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 MEP1AP4-201ENST00000423244 1087 ntBASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 AC055876.2-201ENST00000531834 546 ntBASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 API5-211ENST00000534695 560 ntTSL 5 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 SLC7A15P-201ENST00000424028 1363 ntBASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SMARCC2Q8TAQ2 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 CICP23-201ENST00000605013 2741 ntBASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 AC104457.1-201ENST00000401024 814 ntBASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms