Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 KRT43P-201ENST00000434019 910 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 RPL13AP25-201ENST00000484130 612 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 AC104989.1-201ENST00000519711 778 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 TDH-203ENST00000531764 1110 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 AC133552.6-201ENST00000613406 534 ntBASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.05■□□□□ 0.16
PHTF2Q8N3S3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 SOCS2P1-201ENST00000417727 557 ntBASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 AP001889.1-201ENST00000525414 633 ntBASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PHTF2Q8N3S3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AP003680.1-201ENST00000598970 3660 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AC093525.8-201ENST00000624099 1342 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AC005229.1-201ENST00000392885 409 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 C1QBPP1-201ENST00000400117 770 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 BNIP3P42-201ENST00000454982 569 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 KRT18P43-201ENST00000469825 1281 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AC068587.3-201ENST00000526613 355 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 BNIP3P29-201ENST00000598302 571 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AC011447.5-201ENST00000616168 564 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 AC011477.6-201ENST00000604980 1927 ntBASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PHTF2Q8N3S3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms