Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.71■□□□□ 0.27
HERC6Q8IVU3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC253536.4-201ENST00000440539 267 ntBASIC16.71■□□□□ 0.27
HERC6Q8IVU3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 LDHBP1-201ENST00000455730 1119 ntBASIC16.71■□□□□ 0.27
HERC6Q8IVU3 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AC244157.2-201ENST00000616239 1006 ntBASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AP001505.2-201ENST00000616815 443 ntBASIC16.71■□□□□ 0.27
HERC6Q8IVU3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HERC6Q8IVU3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.26
HERC6Q8IVU3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HERC6Q8IVU3 AC005052.1-201ENST00000625181 2492 ntBASIC16.71■□□□□ 0.26
HERC6Q8IVU3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 NKAIN1P1-201ENST00000435754 582 ntBASIC16.7■□□□□ 0.26
HERC6Q8IVU3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 AC044849.1-201ENST00000519737 1188 ntBASIC16.7■□□□□ 0.26
HERC6Q8IVU3 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HERC6Q8IVU3 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HERC6Q8IVU3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms