Protein–RNA interactions for Protein: Q8IV35

WDR49, WD repeat-containing protein 49, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WDR49Q8IV35 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 AP001063.1-201ENST00000568332 529 ntBASIC16.61■□□□□ 0.25
WDR49Q8IV35 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 RPSAP52-203ENST00000622976 1023 ntBASIC16.61■□□□□ 0.25
WDR49Q8IV35 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
WDR49Q8IV35 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
WDR49Q8IV35 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MST1L-201ENST00000442552 2185 ntBASIC16.6■□□□□ 0.25
WDR49Q8IV35 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 ACKR1-201ENST00000368121 1240 ntBASIC16.6■□□□□ 0.25
WDR49Q8IV35 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 AC010319.3-201ENST00000597028 470 ntBASIC16.6■□□□□ 0.25
WDR49Q8IV35 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 AC023157.3-201ENST00000619086 2088 ntBASIC16.6■□□□□ 0.25
WDR49Q8IV35 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
WDR49Q8IV35 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
WDR49Q8IV35 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 AL158070.2-201ENST00000623713 1621 ntBASIC16.59■□□□□ 0.25
WDR49Q8IV35 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
WDR49Q8IV35 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
WDR49Q8IV35 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms