Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRTM4Q86VH4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRTM4Q86VH4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LRRTM4Q86VH4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.19■□□□□ 0.02
LRRTM4Q86VH4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LRRTM4Q86VH4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC004066.1-201ENST00000502488 802 ntBASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 PTP4A1P2-201ENST00000546033 454 ntBASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 CLUHP6-201ENST00000580789 941 ntBASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 RPSAP52-203ENST00000622976 1023 ntBASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 BX539320.1-201ENST00000623759 877 ntBASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC005252.2-201ENST00000624630 1141 ntBASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.18■□□□□ 0.02
LRRTM4Q86VH4 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.17■□□□□ 0.02
LRRTM4Q86VH4 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms