Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.91■□□□□ 0.46
USP50Q70EL3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
USP50Q70EL3 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.91■□□□□ 0.46
USP50Q70EL3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP50Q70EL3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
USP50Q70EL3 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC17.91■□□□□ 0.46
USP50Q70EL3 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC17.91■□□□□ 0.46
USP50Q70EL3 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC17.91■□□□□ 0.46
USP50Q70EL3 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 AL161773.1-201ENST00000624845 863 ntBASIC17.91■□□□□ 0.46
USP50Q70EL3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 AC106820.2-201ENST00000563775 3264 ntBASIC17.91■□□□□ 0.46
USP50Q70EL3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
USP50Q70EL3 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.91■□□□□ 0.46
USP50Q70EL3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
USP50Q70EL3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
USP50Q70EL3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
USP50Q70EL3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
USP50Q70EL3 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.9■□□□□ 0.46
USP50Q70EL3 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
USP50Q70EL3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 SOD2-202ENST00000367054 815 ntTSL 2 BASIC17.9■□□□□ 0.46
USP50Q70EL3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.9■□□□□ 0.46
USP50Q70EL3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC17.9■□□□□ 0.46
USP50Q70EL3 AC005962.1-201ENST00000584100 773 ntBASIC17.9■□□□□ 0.46
USP50Q70EL3 MEG3_2.1-201ENST00000611456 105 ntBASIC17.9■□□□□ 0.46
USP50Q70EL3 LINC01783-202ENST00000614408 828 ntBASIC17.9■□□□□ 0.46
USP50Q70EL3 BX284668.2-205ENST00000619677 828 ntBASIC17.9■□□□□ 0.46
USP50Q70EL3 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC17.9■□□□□ 0.46
USP50Q70EL3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.9■□□□□ 0.46
USP50Q70EL3 FRMPD2B-201ENST00000431305 1347 ntBASIC17.9■□□□□ 0.46
USP50Q70EL3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.9■□□□□ 0.46
USP50Q70EL3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.9■□□□□ 0.46
USP50Q70EL3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
USP50Q70EL3 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
USP50Q70EL3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
USP50Q70EL3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC17.89■□□□□ 0.45
USP50Q70EL3 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 CHCHD2P9-201ENST00000461726 456 ntBASIC17.89■□□□□ 0.45
USP50Q70EL3 RPL18AP3-201ENST00000462885 528 ntBASIC17.89■□□□□ 0.45
USP50Q70EL3 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.89■□□□□ 0.45
USP50Q70EL3 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.89■□□□□ 0.45
USP50Q70EL3 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.89■□□□□ 0.45
USP50Q70EL3 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 AL157813.1-201ENST00000612996 587 ntBASIC17.89■□□□□ 0.45
USP50Q70EL3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.89■□□□□ 0.45
USP50Q70EL3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
USP50Q70EL3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
USP50Q70EL3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms