Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 PTP4A1P2-201ENST00000546033 454 ntBASIC18.38■□□□□ 0.53
CTR9Q6PD62 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 AC009486.1-201ENST00000569860 813 ntBASIC18.38■□□□□ 0.53
CTR9Q6PD62 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 AC018665.1-201ENST00000622927 1362 ntBASIC18.38■□□□□ 0.53
CTR9Q6PD62 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CTR9Q6PD62 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CTR9Q6PD62 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 ACKR1-201ENST00000368121 1240 ntBASIC18.37■□□□□ 0.53
CTR9Q6PD62 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 BRF1-202ENST00000379932 884 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 AC012441.1-201ENST00000446669 685 ntBASIC18.37■□□□□ 0.53
CTR9Q6PD62 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 IGHV3-71-201ENST00000523324 359 ntBASIC18.37■□□□□ 0.53
CTR9Q6PD62 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 PIGL-212ENST00000581006 554 ntTSL 4 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CTR9Q6PD62 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
CTR9Q6PD62 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.36■□□□□ 0.53
CTR9Q6PD62 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTR9Q6PD62 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 ATP5G2P4-201ENST00000442175 420 ntBASIC18.36■□□□□ 0.53
CTR9Q6PD62 BCRP2-202ENST00000447763 634 ntBASIC18.36■□□□□ 0.53
CTR9Q6PD62 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CTR9Q6PD62 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms