Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 IRF3-215ENST00000596822 823 ntTSL 3 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 AC097065.1-201ENST00000425737 517 ntBASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
VPS13DQ5THJ4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 RPS9P1-201ENST00000419943 583 ntBASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 MIR6858-201ENST00000620733 67 ntBASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 TUBB8P8-201ENST00000458717 1058 ntBASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AC018629.1-201ENST00000623381 1736 ntBASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
VPS13DQ5THJ4 AR-207ENST00000612010 3896 ntTSL 5 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AL590440.2-201ENST00000641973 1595 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AC092171.5-201ENST00000608012 942 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 TBC1D3J-201ENST00000620719 1426 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AL139008.1-201ENST00000437894 228 ntBASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC10.1□□□□□ -0.79
VPS13DQ5THJ4 AC002472.4-201ENST00000641915 272 ntBASIC10.1□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms