Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
RFX7Q2KHR2 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 ZBED1P1-201ENST00000502364 1930 ntBASIC18.58■□□□□ 0.56
RFX7Q2KHR2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 AL138799.1-201ENST00000448213 1675 ntBASIC18.58■□□□□ 0.56
RFX7Q2KHR2 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.58■□□□□ 0.56
RFX7Q2KHR2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 MST1L-201ENST00000442552 2185 ntBASIC18.57■□□□□ 0.56
RFX7Q2KHR2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 AC007787.1-201ENST00000588095 1583 ntBASIC18.57■□□□□ 0.56
RFX7Q2KHR2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 AP000845.1-201ENST00000581677 2131 ntBASIC18.57■□□□□ 0.56
RFX7Q2KHR2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
RFX7Q2KHR2 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 USB1-203ENST00000539737 1212 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
RFX7Q2KHR2 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 B9D1-203ENST00000395615 805 ntTSL 3 BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 ACTBP11-201ENST00000436287 1126 ntBASIC18.55■□□□□ 0.56
RFX7Q2KHR2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 AC007551.1-201ENST00000457394 519 ntBASIC18.55■□□□□ 0.56
RFX7Q2KHR2 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RFX7Q2KHR2 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms