Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
DSC1Q08554 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.31■□□□□ 0.2
DSC1Q08554 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 PCDHA1-201ENST00000378133 2726 ntBASIC16.31■□□□□ 0.2
DSC1Q08554 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
DSC1Q08554 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 MST1L-201ENST00000442552 2185 ntBASIC16.3■□□□□ 0.2
DSC1Q08554 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.3■□□□□ 0.2
DSC1Q08554 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
DSC1Q08554 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.3■□□□□ 0.2
DSC1Q08554 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.3■□□□□ 0.2
DSC1Q08554 MESTP3-201ENST00000503460 968 ntBASIC16.3■□□□□ 0.2
DSC1Q08554 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.3■□□□□ 0.2
DSC1Q08554 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
DSC1Q08554 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.3■□□□□ 0.2
DSC1Q08554 AC244157.2-201ENST00000616239 1006 ntBASIC16.3■□□□□ 0.2
DSC1Q08554 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.3■□□□□ 0.2
DSC1Q08554 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.3■□□□□ 0.2
DSC1Q08554 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 CICP11-201ENST00000434745 2827 ntBASIC16.3■□□□□ 0.2
DSC1Q08554 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
DSC1Q08554 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 AC092850.2-201ENST00000623821 2697 ntBASIC16.3■□□□□ 0.2
DSC1Q08554 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.3■□□□□ 0.2
DSC1Q08554 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
DSC1Q08554 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 AL157414.3-201ENST00000624276 1954 ntBASIC16.29■□□□□ 0.2
DSC1Q08554 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
DSC1Q08554 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
DSC1Q08554 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.29■□□□□ 0.2
DSC1Q08554 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
DSC1Q08554 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
DSC1Q08554 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 POM121L10P-201ENST00000436994 1285 ntBASIC16.29■□□□□ 0.2
DSC1Q08554 CHMP1AP1-201ENST00000445563 662 ntBASIC16.29■□□□□ 0.2
DSC1Q08554 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC16.29■□□□□ 0.2
DSC1Q08554 AC026434.2-201ENST00000506094 1078 ntBASIC16.29■□□□□ 0.2
DSC1Q08554 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.29■□□□□ 0.2
DSC1Q08554 RNF41-210ENST00000552244 716 ntTSL 3 BASIC16.29■□□□□ 0.2
DSC1Q08554 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.29■□□□□ 0.2
DSC1Q08554 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.29■□□□□ 0.2
DSC1Q08554 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.29■□□□□ 0.2
DSC1Q08554 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.29■□□□□ 0.2
DSC1Q08554 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
DSC1Q08554 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.28■□□□□ 0.2
DSC1Q08554 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
DSC1Q08554 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.28■□□□□ 0.2
DSC1Q08554 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.28■□□□□ 0.2
DSC1Q08554 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
DSC1Q08554 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
DSC1Q08554 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms