Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 AC136621.1-201ENST00000624017 2304 ntBASIC16.23■□□□□ 0.19
IRX4P78413 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
IRX4P78413 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.23■□□□□ 0.19
IRX4P78413 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 AC098859.1-201ENST00000502915 1238 ntBASIC16.23■□□□□ 0.19
IRX4P78413 RNA5SP410-201ENST00000516285 106 ntBASIC16.23■□□□□ 0.19
IRX4P78413 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
IRX4P78413 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
IRX4P78413 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 AL606495.2-201ENST00000605867 535 ntBASIC16.23■□□□□ 0.19
IRX4P78413 AC007431.3-201ENST00000623221 587 ntBASIC16.23■□□□□ 0.19
IRX4P78413 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.23■□□□□ 0.19
IRX4P78413 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.23■□□□□ 0.19
IRX4P78413 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
IRX4P78413 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 TNRC18P2-201ENST00000417666 2714 ntBASIC16.23■□□□□ 0.19
IRX4P78413 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IRX4P78413 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
IRX4P78413 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.22■□□□□ 0.19
IRX4P78413 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 CICP13-201ENST00000422015 2789 ntBASIC16.22■□□□□ 0.19
IRX4P78413 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IRX4P78413 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.22■□□□□ 0.19
IRX4P78413 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 RN7SL618P-201ENST00000477850 296 ntBASIC16.22■□□□□ 0.19
IRX4P78413 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.22■□□□□ 0.19
IRX4P78413 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.22■□□□□ 0.19
IRX4P78413 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 AC044860.1-202ENST00000559481 777 ntBASIC16.22■□□□□ 0.19
IRX4P78413 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.22■□□□□ 0.19
IRX4P78413 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.22■□□□□ 0.19
IRX4P78413 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
IRX4P78413 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC16.22■□□□□ 0.19
IRX4P78413 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IRX4P78413 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IRX4P78413 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IRX4P78413 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms