Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.78■□□□□ 0.28
SNRPFP62306 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SNRPFP62306 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SNRPFP62306 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SNRPFP62306 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SNRPFP62306 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRPFP62306 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.77■□□□□ 0.28
SNRPFP62306 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.77■□□□□ 0.28
SNRPFP62306 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SNRPFP62306 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
SNRPFP62306 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRPFP62306 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.77■□□□□ 0.28
SNRPFP62306 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SNRPFP62306 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.77■□□□□ 0.28
SNRPFP62306 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.77■□□□□ 0.28
SNRPFP62306 AL162726.2-201ENST00000438986 1017 ntBASIC16.77■□□□□ 0.28
SNRPFP62306 AC114812.1-204ENST00000449669 728 ntBASIC16.77■□□□□ 0.28
SNRPFP62306 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.77■□□□□ 0.28
SNRPFP62306 AC027307.3-201ENST00000594262 1100 ntBASIC16.77■□□□□ 0.28
SNRPFP62306 AC008494.3-201ENST00000606615 944 ntBASIC16.77■□□□□ 0.28
SNRPFP62306 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.77■□□□□ 0.28
SNRPFP62306 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.77■□□□□ 0.28
SNRPFP62306 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNRPFP62306 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
SNRPFP62306 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.77■□□□□ 0.27
SNRPFP62306 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.77■□□□□ 0.27
SNRPFP62306 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
SNRPFP62306 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SNRPFP62306 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.77■□□□□ 0.27
SNRPFP62306 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNRPFP62306 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.76■□□□□ 0.27
SNRPFP62306 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SNRPFP62306 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
SNRPFP62306 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SNRPFP62306 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.76■□□□□ 0.27
SNRPFP62306 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SNRPFP62306 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.76■□□□□ 0.27
SNRPFP62306 CTBP2P3-201ENST00000585629 1255 ntBASIC16.76■□□□□ 0.27
SNRPFP62306 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.76■□□□□ 0.27
SNRPFP62306 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.76■□□□□ 0.27
SNRPFP62306 AL158070.2-201ENST00000623713 1621 ntBASIC16.76■□□□□ 0.27
SNRPFP62306 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SNRPFP62306 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.76■□□□□ 0.27
SNRPFP62306 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.76■□□□□ 0.27
SNRPFP62306 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SNRPFP62306 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNRPFP62306 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
SNRPFP62306 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRPFP62306 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SNRPFP62306 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNRPFP62306 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.75■□□□□ 0.27
SNRPFP62306 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.75■□□□□ 0.27
SNRPFP62306 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRPFP62306 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNRPFP62306 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms