Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.1■□□□□ 0.49
RHBDL3P58872 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 GRN-222ENST00000639447 1314 ntTSL 2 BASIC18.1■□□□□ 0.49
RHBDL3P58872 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.1■□□□□ 0.49
RHBDL3P58872 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
RHBDL3P58872 KRTAP10-13P-201ENST00000412914 571 ntBASIC18.1■□□□□ 0.49
RHBDL3P58872 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC18.1■□□□□ 0.49
RHBDL3P58872 AC004898.1-201ENST00000451057 766 ntBASIC18.1■□□□□ 0.49
RHBDL3P58872 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.1■□□□□ 0.49
RHBDL3P58872 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.1■□□□□ 0.49
RHBDL3P58872 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.1■□□□□ 0.49
RHBDL3P58872 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.1■□□□□ 0.49
RHBDL3P58872 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.1■□□□□ 0.49
RHBDL3P58872 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
RHBDL3P58872 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.09■□□□□ 0.49
RHBDL3P58872 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
RHBDL3P58872 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
RHBDL3P58872 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 AC079178.1-201ENST00000420915 656 ntBASIC18.09■□□□□ 0.49
RHBDL3P58872 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.09■□□□□ 0.49
RHBDL3P58872 HIST2H2BB-201ENST00000449108 381 ntBASIC18.09■□□□□ 0.49
RHBDL3P58872 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.09■□□□□ 0.49
RHBDL3P58872 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC18.09■□□□□ 0.49
RHBDL3P58872 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.09■□□□□ 0.49
RHBDL3P58872 ZACNP1-201ENST00000612259 710 ntBASIC18.09■□□□□ 0.49
RHBDL3P58872 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC18.09■□□□□ 0.49
RHBDL3P58872 AC244157.2-201ENST00000616239 1006 ntBASIC18.09■□□□□ 0.49
RHBDL3P58872 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
RHBDL3P58872 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
RHBDL3P58872 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.09■□□□□ 0.49
RHBDL3P58872 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RHBDL3P58872 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
RHBDL3P58872 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RHBDL3P58872 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RHBDL3P58872 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC18.08■□□□□ 0.49
RHBDL3P58872 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RHBDL3P58872 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RHBDL3P58872 KRT8P4-201ENST00000509735 1454 ntBASIC18.08■□□□□ 0.49
RHBDL3P58872 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
RHBDL3P58872 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RHBDL3P58872 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RHBDL3P58872 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC18.08■□□□□ 0.49
RHBDL3P58872 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RHBDL3P58872 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.08■□□□□ 0.49
RHBDL3P58872 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.08■□□□□ 0.48
RHBDL3P58872 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
RHBDL3P58872 FTLP10-202ENST00000505798 471 ntBASIC18.08■□□□□ 0.48
RHBDL3P58872 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.08■□□□□ 0.48
RHBDL3P58872 NCK2-206ENST00000522586 490 ntTSL 5 BASIC18.08■□□□□ 0.48
RHBDL3P58872 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC18.08■□□□□ 0.48
RHBDL3P58872 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.08■□□□□ 0.48
RHBDL3P58872 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.08■□□□□ 0.48
RHBDL3P58872 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC18.08■□□□□ 0.48
RHBDL3P58872 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC18.08■□□□□ 0.48
RHBDL3P58872 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
RHBDL3P58872 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RHBDL3P58872 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RHBDL3P58872 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
RHBDL3P58872 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.08■□□□□ 0.48
RHBDL3P58872 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
RHBDL3P58872 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
RHBDL3P58872 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC18.08■□□□□ 0.48
RHBDL3P58872 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
RHBDL3P58872 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
RHBDL3P58872 AL137783.1-201ENST00000623494 1896 ntBASIC18.07■□□□□ 0.48
RHBDL3P58872 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
RHBDL3P58872 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.07■□□□□ 0.48
RHBDL3P58872 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms