Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CLDN20P56880 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN20P56880 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN20P56880 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN20P56880 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CLDN20P56880 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN20P56880 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN20P56880 AC074338.1-201ENST00000416825 156 ntBASIC14.27□□□□□ -0.13
CLDN20P56880 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CLDN20P56880 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN20P56880 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN20P56880 AL589987.1-201ENST00000453380 819 ntBASIC14.27□□□□□ -0.13
CLDN20P56880 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN20P56880 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN20P56880 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN20P56880 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN20P56880 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.13
CLDN20P56880 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN20P56880 LINC01115-203ENST00000606068 577 ntBASIC14.27□□□□□ -0.13
CLDN20P56880 AC004233.3-201ENST00000607794 1269 ntBASIC14.27□□□□□ -0.13
CLDN20P56880 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.27□□□□□ -0.13
CLDN20P56880 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
CLDN20P56880 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLDN20P56880 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN20P56880 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CLDN20P56880 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN20P56880 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLDN20P56880 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN20P56880 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN20P56880 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
CLDN20P56880 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 SPDYE19P-201ENST00000338590 713 ntBASIC14.26□□□□□ -0.13
CLDN20P56880 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 DOC2GP-202ENST00000514950 1163 ntBASIC14.26□□□□□ -0.13
CLDN20P56880 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN20P56880 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.26□□□□□ -0.13
CLDN20P56880 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.26□□□□□ -0.13
CLDN20P56880 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 SRD5A3P1-201ENST00000603021 949 ntBASIC14.26□□□□□ -0.13
CLDN20P56880 AC097359.3-201ENST00000603982 1210 ntBASIC14.26□□□□□ -0.13
CLDN20P56880 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.26□□□□□ -0.13
CLDN20P56880 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CLDN20P56880 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.26□□□□□ -0.13
CLDN20P56880 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CLDN20P56880 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CLDN20P56880 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms