Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.83□□□□□ -0.19
GFRA1P56159 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
GFRA1P56159 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
GFRA1P56159 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.83□□□□□ -0.2
GFRA1P56159 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 AL158070.2-201ENST00000623713 1621 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 RNU1-114P-201ENST00000365297 166 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 ACTBP8-201ENST00000403258 1108 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 KLF2P2-201ENST00000416807 1039 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 GHSR-202ENST00000427970 912 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.83□□□□□ -0.2
GFRA1P56159 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
GFRA1P56159 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 GNRHR2-203ENST00000581100 1187 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.83□□□□□ -0.2
GFRA1P56159 AL359881.2-201ENST00000602973 570 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 MIR6805-201ENST00000615055 62 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC13.83□□□□□ -0.2
GFRA1P56159 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.83□□□□□ -0.2
GFRA1P56159 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.83□□□□□ -0.2
GFRA1P56159 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 KRT8P35-201ENST00000483942 1338 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
GFRA1P56159 PAUPAR-201ENST00000630360 2965 ntBASIC13.83□□□□□ -0.2
GFRA1P56159 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.83□□□□□ -0.2
GFRA1P56159 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
GFRA1P56159 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 TMBIM7P-203ENST00000641617 1718 ntBASIC13.82□□□□□ -0.2
GFRA1P56159 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 PDIA3P1-201ENST00000471856 1510 ntBASIC13.82□□□□□ -0.2
GFRA1P56159 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.82□□□□□ -0.2
GFRA1P56159 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 AC244107.1-201ENST00000442033 332 ntBASIC13.82□□□□□ -0.2
GFRA1P56159 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
GFRA1P56159 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 SNX29P1-201ENST00000548357 1007 ntBASIC13.82□□□□□ -0.2
GFRA1P56159 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.82□□□□□ -0.2
GFRA1P56159 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 CICP11-201ENST00000434745 2827 ntBASIC13.82□□□□□ -0.2
GFRA1P56159 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.82□□□□□ -0.2
GFRA1P56159 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GFRA1P56159 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.82□□□□□ -0.2
GFRA1P56159 SSR4P1-203ENST00000599569 2260 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms