Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDH8P55286 SUN1-204ENST00000403868 978 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH8P55286 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.51■□□□□ 0.23
CDH8P55286 RPSAP52-203ENST00000622976 1023 ntBASIC16.51■□□□□ 0.23
CDH8P55286 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.51■□□□□ 0.23
CDH8P55286 AL358472.5-202ENST00000641448 1267 ntBASIC16.51■□□□□ 0.23
CDH8P55286 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 AC023024.2-201ENST00000623561 1993 ntBASIC16.51■□□□□ 0.23
CDH8P55286 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDH8P55286 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.51■□□□□ 0.23
CDH8P55286 AC091951.1-201ENST00000512854 2465 ntBASIC16.51■□□□□ 0.23
CDH8P55286 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDH8P55286 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH8P55286 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CDH8P55286 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH8P55286 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 GRAP-202ENST00000395635 834 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDH8P55286 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH8P55286 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH8P55286 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH8P55286 IGHV3-72-202ENST00000621503 303 ntBASIC16.5■□□□□ 0.23
CDH8P55286 CU634019.7-201ENST00000624153 1185 ntBASIC16.5■□□□□ 0.23
CDH8P55286 FP236241.2-201ENST00000624906 1185 ntBASIC16.5■□□□□ 0.23
CDH8P55286 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH8P55286 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDH8P55286 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH8P55286 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH8P55286 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH8P55286 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH8P55286 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDH8P55286 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 AL109954.1-202ENST00000564051 2148 ntBASIC16.49■□□□□ 0.23
CDH8P55286 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH8P55286 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH8P55286 AC148477.4-201ENST00000613430 1793 ntBASIC16.49■□□□□ 0.23
CDH8P55286 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CDH8P55286 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 AC126177.1-201ENST00000547829 2218 ntBASIC16.49■□□□□ 0.23
CDH8P55286 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH8P55286 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH8P55286 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDH8P55286 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
CDH8P55286 SOCS2P1-201ENST00000417727 557 ntBASIC16.49■□□□□ 0.23
CDH8P55286 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.49■□□□□ 0.23
CDH8P55286 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.49■□□□□ 0.23
CDH8P55286 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH8P55286 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH8P55286 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH8P55286 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH8P55286 AC093813.1-201ENST00000605066 256 ntBASIC16.49■□□□□ 0.23
CDH8P55286 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms