Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 HILS1-202ENST00000545329 423 ntBASIC11.36□□□□□ -0.59
APOC4P55056 NOP2-220ENST00000545915 630 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 AP005482.1-201ENST00000563722 1273 ntBASIC11.36□□□□□ -0.59
APOC4P55056 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 ORC6-206ENST00000568364 888 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 IFT20-216ENST00000588477 774 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
APOC4P55056 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC11.36□□□□□ -0.59
APOC4P55056 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 AL354718.3-201ENST00000616414 581 ntBASIC11.36□□□□□ -0.59
APOC4P55056 BX539320.1-201ENST00000623759 877 ntBASIC11.36□□□□□ -0.59
APOC4P55056 CR382287.1-201ENST00000623954 586 ntBASIC11.36□□□□□ -0.59
APOC4P55056 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 AC018695.7-201ENST00000624587 2492 ntBASIC11.36□□□□□ -0.59
APOC4P55056 AP003680.1-201ENST00000598970 3660 ntBASIC11.36□□□□□ -0.59
APOC4P55056 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.36□□□□□ -0.59
APOC4P55056 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOC4P55056 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.36□□□□□ -0.59
APOC4P55056 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 PCDH8P1-201ENST00000428983 2773 ntBASIC11.35□□□□□ -0.59
APOC4P55056 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
APOC4P55056 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.35□□□□□ -0.59
APOC4P55056 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
APOC4P55056 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.35□□□□□ -0.59
APOC4P55056 AC112492.5-201ENST00000421897 457 ntBASIC11.35□□□□□ -0.59
APOC4P55056 RPL28-203ENST00000428193 573 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC11.35□□□□□ -0.59
APOC4P55056 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.35□□□□□ -0.59
APOC4P55056 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.35□□□□□ -0.59
APOC4P55056 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 RPL28-207ENST00000558815 616 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 AC133552.6-201ENST00000613406 534 ntBASIC11.35□□□□□ -0.59
APOC4P55056 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 POLL-217ENST00000628479 1953 ntTSL 5 BASIC11.35□□□□□ -0.59
APOC4P55056 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOC4P55056 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
APOC4P55056 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms