Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.17□□□□□ -0.14
CENPAP49450 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
CENPAP49450 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 AC138035.3-201ENST00000622706 2791 ntBASIC14.17□□□□□ -0.14
CENPAP49450 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CENPAP49450 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 AL137784.3-201ENST00000623858 2288 ntBASIC14.16□□□□□ -0.14
CENPAP49450 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 MIR346-201ENST00000362234 95 ntBASIC14.16□□□□□ -0.14
CENPAP49450 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.16□□□□□ -0.14
CENPAP49450 AC004832.2-201ENST00000426397 482 ntBASIC14.16□□□□□ -0.14
CENPAP49450 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 EEF1DP4-201ENST00000446006 880 ntBASIC14.16□□□□□ -0.14
CENPAP49450 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.16□□□□□ -0.14
CENPAP49450 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.16□□□□□ -0.14
CENPAP49450 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.16□□□□□ -0.14
CENPAP49450 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.16□□□□□ -0.14
CENPAP49450 AL450472.2-201ENST00000603663 1156 ntBASIC14.16□□□□□ -0.14
CENPAP49450 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 AP3S2-216ENST00000617003 1561 ntBASIC14.16□□□□□ -0.14
CENPAP49450 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.16□□□□□ -0.14
CENPAP49450 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CENPAP49450 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
CENPAP49450 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CENPAP49450 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.15□□□□□ -0.14
CENPAP49450 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.15□□□□□ -0.14
CENPAP49450 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
CENPAP49450 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 ADH5P3-201ENST00000433842 1137 ntBASIC14.15□□□□□ -0.14
CENPAP49450 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CENPAP49450 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.15□□□□□ -0.14
CENPAP49450 PGAM5P1-201ENST00000518923 814 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms