Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.62□□□□□ -0.07
GABRA4P48169 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GABRA4P48169 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 KRT8P14-201ENST00000414254 1442 ntBASIC14.61□□□□□ -0.07
GABRA4P48169 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
GABRA4P48169 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 MPV17-206ENST00000402722 827 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRA4P48169 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRA4P48169 CNN2P8-201ENST00000421872 913 ntBASIC14.61□□□□□ -0.07
GABRA4P48169 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GABRA4P48169 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRA4P48169 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
GABRA4P48169 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.61□□□□□ -0.07
GABRA4P48169 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 AC133552.6-201ENST00000613406 534 ntBASIC14.61□□□□□ -0.07
GABRA4P48169 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
GABRA4P48169 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.61□□□□□ -0.07
GABRA4P48169 AL513477.1-201ENST00000602865 2407 ntBASIC14.61□□□□□ -0.07
GABRA4P48169 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
GABRA4P48169 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
GABRA4P48169 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
GABRA4P48169 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.6□□□□□ -0.07
GABRA4P48169 AC099336.1-201ENST00000417053 1171 ntBASIC14.6□□□□□ -0.07
GABRA4P48169 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 RPS2P32-201ENST00000439199 892 ntBASIC14.6□□□□□ -0.07
GABRA4P48169 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.6□□□□□ -0.07
GABRA4P48169 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.6□□□□□ -0.07
GABRA4P48169 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC14.6□□□□□ -0.07
GABRA4P48169 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
GABRA4P48169 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
GABRA4P48169 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
GABRA4P48169 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
GABRA4P48169 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms