Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.59□□□□□ -0.23
GDNFP39905 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.59□□□□□ -0.23
GDNFP39905 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.59□□□□□ -0.23
GDNFP39905 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.59□□□□□ -0.23
GDNFP39905 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.59□□□□□ -0.23
GDNFP39905 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
GDNFP39905 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GDNFP39905 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
GDNFP39905 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
GDNFP39905 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.58□□□□□ -0.23
GDNFP39905 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
GDNFP39905 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
GDNFP39905 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
GDNFP39905 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 AC136759.1-202ENST00000530858 2194 ntBASIC13.58□□□□□ -0.24
GDNFP39905 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
GDNFP39905 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.58□□□□□ -0.24
GDNFP39905 AC092474.2-201ENST00000424288 719 ntBASIC13.58□□□□□ -0.24
GDNFP39905 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 AC109635.5-201ENST00000533593 962 ntBASIC13.58□□□□□ -0.24
GDNFP39905 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.58□□□□□ -0.24
GDNFP39905 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
GDNFP39905 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GDNFP39905 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.58□□□□□ -0.24
GDNFP39905 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 AC018892.3-201ENST00000623986 2499 ntBASIC13.57□□□□□ -0.24
GDNFP39905 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 AC005252.3-201ENST00000623855 2258 ntBASIC13.57□□□□□ -0.24
GDNFP39905 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 AL645939.2-201ENST00000427340 991 ntBASIC13.57□□□□□ -0.24
GDNFP39905 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.57□□□□□ -0.24
GDNFP39905 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.57□□□□□ -0.24
GDNFP39905 MIR4321-201ENST00000592276 80 ntBASIC13.57□□□□□ -0.24
GDNFP39905 AC099522.2-201ENST00000607001 744 ntBASIC13.57□□□□□ -0.24
GDNFP39905 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
GDNFP39905 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
GDNFP39905 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
GDNFP39905 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms