Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 MSTO2P-201ENST00000314835 1709 ntBASIC16.32■□□□□ 0.2
GRIK1P39086 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIK1P39086 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
GRIK1P39086 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 AL355864.2-201ENST00000447420 863 ntBASIC16.32■□□□□ 0.2
GRIK1P39086 AC105250.1-201ENST00000509378 2057 ntBASIC16.32■□□□□ 0.2
GRIK1P39086 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
GRIK1P39086 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIK1P39086 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.32■□□□□ 0.2
GRIK1P39086 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
GRIK1P39086 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
GRIK1P39086 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
GRIK1P39086 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.32■□□□□ 0.2
GRIK1P39086 AC067930.6-201ENST00000623257 4947 ntBASIC16.32■□□□□ 0.2
GRIK1P39086 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
GRIK1P39086 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.32■□□□□ 0.2
GRIK1P39086 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 ACKR1-201ENST00000368121 1240 ntBASIC16.31■□□□□ 0.2
GRIK1P39086 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIK1P39086 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIK1P39086 AP001889.1-201ENST00000525414 633 ntBASIC16.31■□□□□ 0.2
GRIK1P39086 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.31■□□□□ 0.2
GRIK1P39086 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.31■□□□□ 0.2
GRIK1P39086 BX539320.1-201ENST00000623759 877 ntBASIC16.31■□□□□ 0.2
GRIK1P39086 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.31■□□□□ 0.2
GRIK1P39086 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
GRIK1P39086 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.31■□□□□ 0.2
GRIK1P39086 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIK1P39086 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIK1P39086 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 NORAD-201ENST00000565493 5339 ntBASIC16.3■□□□□ 0.2
GRIK1P39086 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIK1P39086 PAUPAR-201ENST00000630360 2965 ntBASIC16.3■□□□□ 0.2
GRIK1P39086 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
GRIK1P39086 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
GRIK1P39086 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIK1P39086 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIK1P39086 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIK1P39086 AC005229.1-201ENST00000392885 409 ntBASIC16.3■□□□□ 0.2
GRIK1P39086 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.3■□□□□ 0.2
GRIK1P39086 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.3■□□□□ 0.2
GRIK1P39086 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
GRIK1P39086 AC012441.1-201ENST00000446669 685 ntBASIC16.3■□□□□ 0.2
GRIK1P39086 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms