Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC069224.1-201ENST00000566372 1715 ntBASIC18.88■□□□□ 0.61
PDE6BP35913 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDE6BP35913 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDE6BP35913 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
PDE6BP35913 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDE6BP35913 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.87■□□□□ 0.61
PDE6BP35913 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.87■□□□□ 0.61
PDE6BP35913 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC18.87■□□□□ 0.61
PDE6BP35913 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.87■□□□□ 0.61
PDE6BP35913 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
PDE6BP35913 AL596087.1-201ENST00000400979 1969 ntBASIC18.87■□□□□ 0.61
PDE6BP35913 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6BP35913 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 PUDPP3-201ENST00000445368 636 ntBASIC18.87■□□□□ 0.61
PDE6BP35913 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PDE6BP35913 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6BP35913 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6BP35913 DUX4L47-201ENST00000566374 394 ntBASIC18.87■□□□□ 0.61
PDE6BP35913 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6BP35913 AC090164.2-201ENST00000611487 516 ntBASIC18.87■□□□□ 0.61
PDE6BP35913 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.87■□□□□ 0.61
PDE6BP35913 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.87■□□□□ 0.61
PDE6BP35913 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6BP35913 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.86■□□□□ 0.61
PDE6BP35913 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 AP000593.2-201ENST00000542775 1433 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6BP35913 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6BP35913 AC100827.2-201ENST00000563214 1194 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 AC020922.3-201ENST00000595064 547 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 AC004466.1-201ENST00000599515 1080 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 AP003419.4-201ENST00000616071 517 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 AGGF1P2-201ENST00000426656 2106 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6BP35913 AC011676.5-201ENST00000624864 2660 ntBASIC18.86■□□□□ 0.61
PDE6BP35913 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6BP35913 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDE6BP35913 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDE6BP35913 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
PDE6BP35913 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6BP35913 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 FKBP4P6-201ENST00000457486 1332 ntBASIC18.85■□□□□ 0.61
PDE6BP35913 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6BP35913 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE6BP35913 AC104784.1-201ENST00000473096 294 ntBASIC18.85■□□□□ 0.61
PDE6BP35913 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE6BP35913 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms