Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
XPAP23025 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 AC127383.1-201ENST00000444697 1800 ntBASIC15.66■□□□□ 0.1
XPAP23025 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 C1QBPP1-201ENST00000400117 770 ntBASIC15.66■□□□□ 0.1
XPAP23025 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.66■□□□□ 0.1
XPAP23025 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.66■□□□□ 0.1
XPAP23025 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.66■□□□□ 0.1
XPAP23025 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.66■□□□□ 0.1
XPAP23025 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.66■□□□□ 0.1
XPAP23025 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 BRI3BPP1-201ENST00000594224 787 ntBASIC15.66■□□□□ 0.1
XPAP23025 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 CU634019.7-201ENST00000624153 1185 ntBASIC15.66■□□□□ 0.1
XPAP23025 FP236241.2-201ENST00000624906 1185 ntBASIC15.66■□□□□ 0.1
XPAP23025 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
XPAP23025 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
XPAP23025 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
XPAP23025 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
XPAP23025 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
XPAP23025 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.65■□□□□ 0.1
XPAP23025 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
XPAP23025 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
XPAP23025 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.65■□□□□ 0.1
XPAP23025 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.65■□□□□ 0.1
XPAP23025 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.65■□□□□ 0.1
XPAP23025 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.65■□□□□ 0.1
XPAP23025 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.65■□□□□ 0.1
XPAP23025 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
XPAP23025 AL359711.2-201ENST00000563105 872 ntBASIC15.65■□□□□ 0.1
XPAP23025 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
XPAP23025 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.65■□□□□ 0.1
XPAP23025 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.65■□□□□ 0.1
XPAP23025 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
XPAP23025 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms