Protein–RNA interactions for Protein: P21741

MDK, Midkine, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDKP21741 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC13.04□□□□□ -0.32
MDKP21741 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.04□□□□□ -0.32
MDKP21741 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.04□□□□□ -0.32
MDKP21741 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MDKP21741 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
MDKP21741 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MDKP21741 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
MDKP21741 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
MDKP21741 CICP24-201ENST00000605464 2705 ntBASIC13.04□□□□□ -0.32
MDKP21741 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
MDKP21741 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.03□□□□□ -0.32
MDKP21741 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MDKP21741 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 TMBIM7P-203ENST00000641617 1718 ntBASIC13.03□□□□□ -0.32
MDKP21741 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
MDKP21741 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
MDKP21741 AL353705.2-201ENST00000428243 662 ntBASIC13.03□□□□□ -0.32
MDKP21741 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.03□□□□□ -0.32
MDKP21741 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.03□□□□□ -0.32
MDKP21741 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.03□□□□□ -0.32
MDKP21741 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.03□□□□□ -0.32
MDKP21741 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.03□□□□□ -0.32
MDKP21741 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.03□□□□□ -0.32
MDKP21741 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.03□□□□□ -0.32
MDKP21741 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
MDKP21741 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.03□□□□□ -0.32
MDKP21741 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.03□□□□□ -0.32
MDKP21741 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 CU639417.3-201ENST00000624240 1404 ntBASIC13.03□□□□□ -0.32
MDKP21741 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 AC007541.1-201ENST00000570282 1469 ntBASIC13.03□□□□□ -0.32
MDKP21741 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
MDKP21741 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.03□□□□□ -0.32
MDKP21741 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.02□□□□□ -0.32
MDKP21741 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.02□□□□□ -0.32
MDKP21741 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.02□□□□□ -0.32
MDKP21741 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.02□□□□□ -0.32
MDKP21741 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.02□□□□□ -0.32
MDKP21741 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.02□□□□□ -0.32
MDKP21741 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 AC005840.4-201ENST00000541242 2494 ntBASIC13.02□□□□□ -0.32
MDKP21741 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
MDKP21741 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
MDKP21741 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.02□□□□□ -0.32
MDKP21741 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.02□□□□□ -0.32
MDKP21741 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
MDKP21741 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MDKP21741 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MDKP21741 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC13.02□□□□□ -0.33
MDKP21741 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
MDKP21741 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MDKP21741 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
MDKP21741 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
MDKP21741 ATP5G2P4-201ENST00000442175 420 ntBASIC13.02□□□□□ -0.33
MDKP21741 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
MDKP21741 AC009477.1-201ENST00000452936 217 ntBASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms