Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB3BP20337 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB3BP20337 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.66□□□□□ -0.22
RAB3BP20337 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RAB3BP20337 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
RAB3BP20337 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB3BP20337 CICP20-201ENST00000443330 2801 ntBASIC13.66□□□□□ -0.22
RAB3BP20337 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB3BP20337 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB3BP20337 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB3BP20337 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RAB3BP20337 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.66□□□□□ -0.22
RAB3BP20337 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.66□□□□□ -0.22
RAB3BP20337 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RAB3BP20337 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAB3BP20337 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB3BP20337 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
RAB3BP20337 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 CICP11-201ENST00000434745 2827 ntBASIC13.65□□□□□ -0.22
RAB3BP20337 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 IGLL3P-201ENST00000412472 434 ntBASIC13.65□□□□□ -0.22
RAB3BP20337 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB3BP20337 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB3BP20337 VN2R19P-201ENST00000442399 1052 ntBASIC13.65□□□□□ -0.22
RAB3BP20337 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB3BP20337 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB3BP20337 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.65□□□□□ -0.22
RAB3BP20337 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.65□□□□□ -0.22
RAB3BP20337 SPTSSB-204ENST00000617024 1292 ntBASIC13.65□□□□□ -0.22
RAB3BP20337 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
RAB3BP20337 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.65□□□□□ -0.22
RAB3BP20337 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 MTHFR-210ENST00000641407 2387 ntBASIC13.65□□□□□ -0.22
RAB3BP20337 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
RAB3BP20337 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.65□□□□□ -0.23
RAB3BP20337 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
RAB3BP20337 AL136982.4-201ENST00000437689 1740 ntBASIC13.64□□□□□ -0.23
RAB3BP20337 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB3BP20337 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
RAB3BP20337 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
RAB3BP20337 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB3BP20337 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
RAB3BP20337 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.64□□□□□ -0.23
RAB3BP20337 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB3BP20337 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.64□□□□□ -0.23
RAB3BP20337 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB3BP20337 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.64□□□□□ -0.23
RAB3BP20337 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
RAB3BP20337 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms