Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 DOC2GP-202ENST00000514950 1163 ntBASIC15.67■□□□□ 0.1
HLA-DPA1P20036 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
HLA-DPA1P20036 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 MEP1AP4-201ENST00000423244 1087 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 BCRP1-201ENST00000444246 691 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 RARRES2P5-201ENST00000564013 466 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 AC036164.1-201ENST00000570544 333 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 AC009118.2-201ENST00000613275 655 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 AJ011932.1-201ENST00000621707 465 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
HLA-DPA1P20036 AC023024.2-201ENST00000623561 1993 ntBASIC15.66■□□□□ 0.1
HLA-DPA1P20036 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.65■□□□□ 0.1
HLA-DPA1P20036 TPRX2P-201ENST00000535362 881 ntBASIC15.65■□□□□ 0.1
HLA-DPA1P20036 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms